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New Articles November 12 - 25

Monday, November 26, 2018
Elizabeth (Bizzy) Berg
Whitney Beck
Kasey Fralick

New Articles November 12 - 25 

Broad-Based Journals (8): Ecology, Trends in Ecology and Evolution, Nature, Science, Proceedings of the National Academy of Sciences, Oecologia, Ecological Applications, Oikos, Journal of Applied Ecology

Freshwater-Specific Journals (5): Freshwater Biology, Hydrobiologia, Limnology and Oceanography, River Research and Applications, Marine and Freshwater Research


Gillson, L., H. Biggs, I. P. J. Smit, M. Virah-Sawmy, and K. Rogers. Finding common ground between adaptive management and evidence-based approaches to biodiversity conservation. Trends in Ecology and Evolution.

Ko C-Y., Iwata T., Lee J-Y., Murakami A., Okano J., Ishikawa N.F., Sakai Y., Tayasu I., Itoh M., Song U., Togashi H., Nakano S., Ohte N., & Okuda N. Assessing alpha and beta diversities of benthic macroinvertebrates and their environmental drivers between watersheds with different levels of habitat transformation in Japan. Marine and Freshwater Research.


Cornacchia, L., S. Licci, H. Nepf, A. Folkard, D. Wal, J. Koppel, S. Puijalon, and T. J. Bouma. Turbulence-mediated facilitation of resource uptake in patchy stream macrophytes. Limnology and Oceanography.

Nydahl, A. C., M. B. Wallin, L. J. Tranvik, C. Hiller, K. Attermeyer, J. A. Garrison, F. Chaguaceda, K. Scharnweber, and G. A. Weyhenmeyer. Colored organic matter increases CO2 in meso-eutrophic lake water through altered light climate and acidity. Limnology and Oceanography.

Oliveira E.S. Jr., Temmink R.J.M., Buhler B.F., Souza R.M., Resende N., Spanings T., Muniz C.C., Lamers L.P.M., & Kosten S. Benthivorous fish bioturbation reduces methane emissions, but increases total greenhouse gas emissions. Freshwater Biology.

Romero E., Garnier J., Billen G., Ramarson A., Riou P., & Le Gendre R. Modeling the biogeochemical functioning of the Seine estuary and its coastal zone: Export, retention, and transformations. Limnology and Oceanography.

Sánchez-Ahuactzin, T., M. Rebolledo Vieyra, D. Ortega-Camacho, S. Escobar-Morales, and L. M. Hernández Terrones. Hydrogeochemical processes and trace elements in sediments at the south-eastern Mexican karst aquifer. Marine and Freshwater Research.

Sweetman, A. K., C. R. Smith, C. N. Shulse, B. Maillot, M. Lindh, M. J. Church, K. S. Meyer, D. Oevelen, T. Stratmann, and A. J. Gooday. Key role of bacteria in the short-term cycling of carbon at the abyssal seafloor in a low particulate organic carbon flux region of the eastern Pacific Ocean. Limnology and Oceanography.

Wells N.S. & Eyre B.D. δ15N patterns in three subtropical estuaries show switch from nitrogen “reactors” to “pipes” with increasing degradation. Limnology and Oceanography.

Climate Change

Bronselaer, B., M. Winton, S. M. Griffies, W. J. Hurlin, K. B. Rodgers, O. V. Sergienko, R. J. Stouffer, J. L. Russell. Change in future climate due to Antarctic meltwater. Nature

Murakami, H., E. Levin, T. L. Delworth, R. Gudgel, P.-C. Hsu. Dominant effect of relative tropical Atlantic warming on major hurricane occurrence. Science.

Parkes, D. and B. Marzeion. Twentieth-century contribution to seal-level rise from uncharted glaciers. Nature.

Patricola, C. M., and M. F. Wehner. Anthropogenic influences on major tropical cyclone events. Nature.

Rubenstein, M. A., R. Christophersen, and J. I. Ransom. Trophic implications of a phenological paradigm shift. Bald eagles and salmon in a changing climate. Journal of Applied Ecology.

Community Assemblages and Population Ecology

Caie, P. and J. S. Shima. Patterns of selective predation change with ontogeny but not density in a marine fish. Oecologia.

de Campos, R., E. de O. da Conceição, K. Martens, and J. Higuti. Extreme drought periods can change spatial effects on periphytic ostracod metacommunities in river-floodplain ecosystems. Hydrobiologia.

Fukimori, K., S. Ishida, M. Shimoda, A. Takenaka, M. Akasaka, J. Nishihiro, N. Takamura, T. Kadoya. Incorporating species population dynamics into static prioritization: targeting species undergoing rapid change. Journal of Applied Ecology.

Jonsen, I. D., C. R. McMahon, T. A. Patterson, M. Auger-Methe, R. Harcourt, M. A. Hindell, and S. Bestley. Movement responses to environment: fast inference of variation among southern elephant seals with a mixed effects model. Ecology.

Polishchuk, L. V. and J. L. Bianchard. Uniting discoveries of abundance-size distributions from soils and seas. Trends in Ecology and Evolution.

Taylor, C. M., S. Miyazono, C. A. Cheek, R. J. Edwards, and R. Patiño. The spatial scale of homogenisation and differentiation in Chihuahuan Desert fish assemblages. Freshwater Biology.

Winfield, I. J., R. Berry, and H. Iddon. The cultural importance and international recognition of the Arctic charr Salvelinus alpinus populations of Windermere, UK. Hydrobiologia.

Zhao, T., S. Villeger, and J. Cucherousset. Accounting for intraspecific diversity when examining relationships between non-native species and functional diversity. Oecologia.


Roy, S. G., E. Uchida, S. P. de Souza, B. Blachly, E. Fox, K. Gardner, A. J. Gold, J. Jansujwicz, S. Klein, B. McGreavy, W. Mo, S. M. C. Smith, E. Vogler, K. Wilson, J. Zydlewski, and D. Hart. A multiscale approach to balance trade-offs among dam infrastructure, river restoration, and cost. Proceedings of the National Academy of Sciences.

Sanchis-Ibor C., Segura-Beltrán F., & Navarro-Gómez A. Channel forms and vegetation adjustment to damming in a Mediterranean gravel‐bed river (Serpis River, Spain). River Research and Applications.


Carraro, L., H. Hartikainen, J. Jokela, E. Bertuzzo, and A. Rinaldo. Estimating species distribution and abundance in river networks using environmental DNA. Proceedings of the National Academy of Sciences.

Harper, L. R., N. P. Griffiths, L. Lawson Handley, C. D. Sayer, D. S. Read, K. J. Harper, R. C. Blackman, J. Li, and B. Hänfling. Development and application of environmental DNA surveillance for the threatened crucian carp (Carassius carassius). Freshwater Biology.

Wineland S.M., Welch S.M., Pauley T.K., Apodaca J.J., Olszack M., Mosher J.J., Holmes J.N., & Waldron J.L. Using environmental DNA and occupancy modelling to identify drivers of eastern hellbender (Cryptobranchus alleganiensis alleganiensis) extirpation. Freshwater Biology.


Amodio, P., M. Boeckle, A. K. Schnell, L. Ostoljic, G. Fiorito, and N. S. Clayton. Grow smart and die young: why did cephalopods evolve intelligence? Trends in Ecology and Evolution.

Jeffery, J. E., G. W. Storrs, T. Holland, C. J. Tabin, and P. E. Ahlberg. Unique pelvic fin in a tetrapod-like fossil fish, and the evolution of limb patterning. Proceedings of the National Academy of Scientists.


Albertson R.C. & Pauers M.J. Morphological disparity in ecologically diverse versus constrained lineages of Lake Malaŵi rock-dwelling cichlids. Hydrobiologia.

Chavarie L., Reist J.D., Guzzo M.M., Harwood L. & Power M. Influences of environmental variation on anadromous Arctic charr from the Hornaday River, NWT. Hydrobiologia.

Mozsár, A., P. Sály, L. Antal, S. A. Nagy, and G. Boros. Organismal stoichiometry at the temporal scale: Seasonal variability shapes interspecific differences in fish. Freshwater Biology.

Shima, J. S. and S. E. Swearer. Moonlight enhances growth in larval fish. Ecology.

Silknetter, S., Y. Kanno, K. L. Kanapeckas Métris, E. Cushman, T. L. Darden, and B. K. Peoples. Mutualism or parasitism: Partner abundance affects host fitness in a fish reproductive interaction. Freshwater Biology.

Silva, L. G. M., B. V Beirão, R. C. Falcão, A. L. F. de Castro, and E. W. Dias. It’s a catfish! Novel approaches are needed to study the effects of rapid decompression on benthic species. Marine and Freshwater Research.

Svozil, D. P., R. K. Kopf, R. J. Watts, and A. O. Nicholls. Temperature-dependent larval survival and growth differences among populations of Murray cod (Maccullochella peelii). Marine and Freshwater Research.

Symons, C. C., M. A. Schulhof, H. B. Cavalheri, and J. B. Shurin. Antagonistic effects of temperature and dissolved organic carbon on fish growth in California mountain lakes. Oecologia.

Verspoor, E., M. W. Coulson, R. B. Greer, and D. Knox. Unique sympatric quartet of limnetic, benthic, profundal and piscivorous brown trout populations resolved by 3D sampling and focused molecular marker selection. Freshwater Biology.

Yiu, B. A., D. J. Booth, A. M. Fowler, and D. A. Feary. Macroalgal resource use differences across age and size classes in the dominant temperate herbivorous fish Aplodactylus lophodon (Aplodactylidae). Marine and Freshwater Research.

York, R. A. C. Patil, K. Abdilleh, Z. V. Johnson, M. A. Conte, M. J. Genner, P. T. McGrath, H. B. Fraser, R. D. Fernald, and J. T. Streelman. Behavior-dependent cis regulations reveals genes and pathways associated with bower building in cichlid fishes. Proceedings of the National Academy of Sciences.

Food Webs

Andrade M.C., Fitzgerald D.B., Winemiller K.O., Barbosa P.S., & Giarrizzo T. Trophic niche segregation among herbivorous serrasalmids from rapids of the lower Xingu River, Brazilian Amazon. Hydrobiologia.

Andrade, F. R., L. D. Silva, I. Guedes, A. M. Santos, and P. S. Pompeu. Non-native white piranhas graze preferentially on caudal fins from large netted fishes. Marine and Freshwater Research.

Kelly, M. G., G. Chiriac, A. Soare-Minea, C. Hamchevici, and S. Birk. Defining ecological status of phytobenthos in very large rivers: a case study in practical implementation of the Water Framework Directive in Romania. Hydrobiologia.

Ives, J. T., B. C. McMeans, K. S. McCann, A. T. Fisk, T. B. Johnson, D. B. Bunnell, K. T. Frank, and A. M. Muir. Food-web structure and ecosystem function in the Laurentian Great Lakes—Toward a conceptual model. Freshwater Biology.

Moore, M. V, B. T. De Stasio, K. N. Huizenga, and E. A. Silow. Trophic coupling of the microbial and the classical food web in Lake Baikal, Siberia. Freshwater Biology.


Veith, M., M. Baubkus, S. Kugel, C. Kulpa, T. Reifenrath, M. Schafft, and N. Wagner. Drift compensation in larval European fire salamanders, Salamandra salamandra (Amphibia: Urodela)? Hydrobiologia.

Zylstra, E. R., D. E. Swann, and R. J. Steidl. Surface-water availability governs survival of an amphibian in arid mountain streams. Freshwater Biology.


Bruckerhoff, L. A., D. R. Leasure, D. D. Magoulick. Flow-ecology relationships are spatially structured and differ among flow regimes. Journal of Applied Ecology.

Higgisson, W., S. Briggs, and F. Dyer. Responses of nitre goosefoot (Chenopodium nitrariaceum) to simulated rainfall and depth and duration of experimental flooding. Marine and Freshwater Research.

Schmidt, S. R., G. Lischeid, T. Hintze, and R. Adrian. Disentangling limnological processes in the time-frequency domain. Limnology and Oceanography.

Zhang, W., G. Villarini, G. A. Vecchi, and J. A. Smith. Urbanization exacerbated the rainfall and flooding caused by hurricane Harvey in Houston. Nature.


Zapata, M. J., and S. M. P. Sullivan. Spatial and seasonal variability of emergent aquatic insects and nearshore spiders in a subtropical estuary. Marine and Freshwater Research.

Invasive Species

Gergs R., Gemmer I., Koester M., Rothhaupt K-O., & Behrmann-Godel J. No evidence for a genetic impoverishment of the indigenous amphipod Dikerogammarus villosus (Gervais, 1835) due to the invasion of Gammarus roeselii (Sowinsky, 1894) in Lake Constance. Hydrobiologia.


Mathers, K. L., M. J. Hill, C. D. Wood, and P. J. Wood. The role of fine sediment characteristics and body size on the vertical movement of a freshwater amphipod. Freshwater Biology.

Lake Stratification

Sommer T., Schmid M., & Wüest A. The role of double diffusion for the heat and salt balance in Lake Kivu. Limnology and Oceanography.


Kurita Y. & Kijima A. A noninvasive method for extracting bivalve DNA from the water-filled mantle cavity. Hydrobiologia.


Glassman, S. I., C. Weihe, J. Li, M. B. N. Albright, C. I. Looby, A. C. Martiny, K. K Treseder, S. D. Allison, and J. B. H. Martiny. Decomposition responses to climate depend on microbial community composition. Proceedings of the National Academy of Sciences.


Aarflot J.M., Aksnes D.L., Opdal A.F., Skjoldal H.R., & Fiksen Ø. Caught in broad daylight: Topographic constraints of zooplankton depth distributions. Limnology and Oceanography.

Cavalheri, H. B., C. C. Symons, M. Schulhof, N. T. Jones, J. B. Shurin. Rapid evolution of thermal plasticity in mountain lake Daphnia populations. Oikos.

Ellwood N.T.W., Congestri R., & Ceschin S. The role of phytoplankton in the diet of the bladderwort Utricularia australis  R.Br. (Lentibulariaceae). Freshwater Biology.

Forsblom L., Lehtinen S., & Lindén A. Spatio-temporal population dynamics of six phytoplankton taxa. Hydrobiologia.

Grebner, W., E. C. Berglund, F. Berggren, J. Eklund, S. Harðadóttir, M. X. Andersson, and E. Selander. Induction of defensive traits in marine plankton—new copepodamide structures. Limnology and Oceanography.

Sandhu S.K., Morozov A.Y., Mitra A., & Flynn K. Exploring nonlinear functional responses of zooplankton grazers in dilution experiments via optimization techniques. Limnology and Oceanography.

Simoncelli S., Thackeray S.J., & Wain D.J. Effect of temperature on zooplankton vertical migration velocity. Hydrobiologia.

Wale, N., M. L. Turrill, and M. A. Duffy. A colorful killer: Daphnia infected with the bacterium Spirobacillus cienkowskii exhibit unexpected color variation. Ecology


Powers P.D., Helstab M., & Niezgoda S.L. A process‐based approach to restoring depositional river valleys to Stage 0, an anastomosing channel network. River Research and Applications.

Skov C., Hansen J.H., Baktoft H., Brodersen J., Brönmark C., Hansson L-A., Hulthén K., Chapman B.B., & Nilsson P.A. Biomanipulating streams: a supplementary tool in lake restoration. Hydrobiologia.